With the widespread availability of functional magnetic resonance imaging (fMRI),
there has been rapid progress in identifying neural correlates of cognition and emotion
in the human brain. In conjunction with basic research studies, fMRI has been increasingly
applied in clinical disorders, making it a central research tool in human psychopathology,
psychopharmacology, and genetics. In the present article, we discuss a number of conceptual
and methodological challenges that confront the implementation of fMRI in clinical
and translational research, and we offer a set of recommendations intended to enhance
the interpretability and reproducibility of results in clinical fMRI.
Key Words
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References
- Applying new approaches from cognitive neuroscience to enhance drug development for the treatment of impaired cognition in schizophrenia.Schizophr Bull. 2005; 31: 810-815
- Building memories: Remembering and forgetting of verbal experiences as predicted by brain activity.Science. 1998; 281: 1188-1191
- Imaging recollection and familiarity in the medial temporal lobe: A three-component model.Trends Cogn Sci. 2007; 11: 379-386
- From cognitive to neural models of working memory.Philos Trans R Soc Lond B Biol Sci. 2007; 362: 761-772
- An integrative theory of prefrontal cortex function.Annu Rev Neurosci. 2001; 24: 167-202
- Dissociating the role of the dorsolateral prefrontal and anterior cingulate cortex in cognitive control.Science. 2000; 288: 1835-1838
- Attention to action: Specific modulation of corticocortical interactions in humans.Neuroimage. 2002; 17: 988-998
- Masked presentations of emotional facial expressions modulate amygdala activity without explicit knowledge.J Neurosci. 1998; 18: 411-418
- Contributions of the amygdala to emotion processing: From animal models to human behavior.Neuron. 2005; 48: 175-187
- Increased amygdala response to masked emotional faces in depressed subjects resolves with antidepressant treatment: An fMRI study.Biol Psychiatry. 2001; 50: 651-658
- Can't shake that feeling: Event-related fMRI assessment of sustained amygdala activity in response to emotional information in depressed individuals.Biol Psychiatry. 2002; 51: 693-707
- Amygdala and nucleus accumbens activation to emotional facial expressions in children and adolescents at risk for major depression.Am J Psychiatry. 2008; 165: 90-98
- Beyond hypofrontality: A quantitative meta-analysis of functional neuroimaging studies of working memory in schizophrenia.Hum Brain Mapp. 2005; 25: 60-69
- Lateral and medial hypofrontality in first-episode schizophrenia: Functional activity in a medication-naive state and effects of short-term atypical antipsychotic treatment.Am J Psychiatry. 2005; 162: 2322-2329
- Association of dorsolateral prefrontal cortex dysfunction with disrupted coordinated brain activity in schizophrenia [published online ahead of print June 2]. 2008;
- Association of dorsolateral prefrontal cortex dysfunction with disrupted coordinated brain activity in schizophrenia: Relationship with impaired cognition, behavioral disorganization, and global function [published online ahead of print June 2].Am J Pyschiatry. 2008;
- Schizophrenic subjects show aberrant fMRI activation of dorsolateral prefrontal cortex and basal ganglia during working memory performance.Biol Psychiatry. 2000; 48: 99-109
- Physiological dysfunction of the dorsolateral prefrontal cortex in schizophrenia revisited.Cereb Cortex. 2000; 10: 1078-1092
- Increased hemodynamic response in the hippocampus, thalamus and prefrontal cortex during abnormal sensory gating in schizophrenia.Schizophr Res. 2007; 92: 262-272
- Effect of task conditions on brain responses to threatening faces in social phobics: An event-related functional magnetic resonance imaging study.Biol Psychiatry. 2004; 56: 921-930
- Abnormal attention modulation of fear circuit function in pediatric generalized anxiety disorder.Arch Gen Psychiatry. 2007; 64: 97-106
- A developmental examination of amygdala response to facial expressions [published online ahead of print March 17].J Cogn Neurosci. 2008;
- Amygdala response to facial expressions in children and adults.Biol Psychiatry. 2001; 49: 309-316
- Pathophysiologically based treatment interventions in schizophrenia.Nat Med. 2006; 12: 1016-1022
- Cortical development and thalamic pathology in schizophrenia.Schizophr Bull. 1997; 23: 483-501
- Disorder-specific neuroanatomical correlates of attentional bias in obsessive-compulsive disorder, panic disorder, and hypochondriasis.Arch Gen Psychiatry. 2005; 62: 922-933
- Temporal lobe and “default” hemodynamic brain modes discriminate between schizophrenia and bipolar disorder [published online ahead of print September 25].Hum Brain Mapp. 2007;
- Guidelines for reporting an fMRI study.Neuroimage. 2008; 40: 409-414
- Polishing the windows of the mind.Am J Psychiatry. 2006; 163: 761-763
- Differential carbon dioxide sensitivity in childhood anxiety disorders and nonill comparison group.Arch Gen Psychiatry. 2000; 57: 960-967
- Cortisol and catecholamines in posttraumatic stress disorder: An epidemiologic community study.Arch Gen Psychiatry. 2004; 61: 394-401
- Design and analysis of fMRI studies with neurologically impaired patients.J Magn Reson Imaging. 2006; 23: 816-826
- Brain activations in schizophrenia during a graded memory task studied with functional neuroimaging.Arch Gen Psychiatry. 1998; 55: 1001-1008
- Evaluating fMRI preprocessing pipelines.IEEE Eng Med Biol Mag. 2006; 25: 27-41
- Investigation of low frequency drift in fMRI signal.Neuroimage. 1999; 9: 526-533
- Localization of cardiac-induced signal change in fMRI.Neuroimage. 1999; 9: 407-415
- Image-based method for retrospective correction of physiological motion effects in fMRI: RETROICOR.Magn Reson Med. 2000; 44: 162-167
- Diagnosis and exploration of massively univariate neuroimaging models.Neuroimage. 2003; 19: 1014-1032
- Empirical analyses of BOLD fMRI statistics.Neuroimage. 1997; 5: 179-197
- Event-related functional magnetic resonance imaging: Modelling, inference and optimization.Philos Trans R Soc Lond B Biol Sci. 1999; 354: 1215-1228
- ROC analysis of statistical methods used in functional MRI: Individual subjects.Neuroimage. 1999; 9: 311-329
- Experimental design in fMRI.in: Moonen C.T.W. Bandettini P.A. Functional MRI. Springer, Heidelberg1999
- The impact of temporal regularization on estimates of the BOLD hemodynamic response function: A comparative analysis.Neuroimage. 2008; 40: 1606-1618
- Evaluation of mixed effects in event-related fMRI studies: Impact of first-level design and filtering.Neuroimage. 2004; 22: 1351-1370
- Group analysis in functional neuroimaging: Selecting subjects using similarity measures.Neuroimage. 2003; 20: 2197-2208
- Diagnosis of single-subject and group fMRI data with SPMd.Hum Brain Mapp. 2006; 27: 442-451
- REX: Response exploration for neuroimaging datasets.Neuroinformatics. 2007; 5: 223-234
- False discovery rate revisited: FDR and topological inference using gaussian random fields [published online ahead of print May 23].Neuroimage. 2008;
- Controlling the familywise error rate in functional neuroimaging: A comparative review.Stat Methods Med Res. 2003; 12: 419-446
- Validating cluster size inference: Random field and permutation methods.Neuroimage. 2003; 20: 2343-2356
- Statistical methods of estimation and inference for functional MR image analysis.Magn Reson Med. 1996; 35: 261-277
- Reliability of PET activiation across statistical methods, subject groups, and sample size.Hum Brain Mapp. 1996; 4: 23-46
- Nonparametric permutation tests for functional neuroimaging: A primer with examples.Hum Brain Mapp. 2002; 15: 1-25
- Analysis of a large fMRI cohort: Statistical and methodological issues for group analyses.Neuroimage. 2007; 35: 105-120
- Group analysis and the subject factor in functional magnetic resonance imaging: Analysis of fifty right-handed healthy subjects in a semantic language task.Hum Brain Mapp. 2008; 29: 461-477
- An empirical investigation into the number of subjects required for an event-related fMRI study.Neuroimage. 2004; 22: 879-885
- Scaled subprofile model: A statistical approach to the analysis of functional patterns in positron emission tomographic data.J Cereb Blood Flow Metab. 1987; 7: 649-658
- The assessment of neurological systems with functional imaging.Brain Lang. 2007; 102: 192-199
- Multivariate strategies in functional magnetic resonance imaging.Brain Lang. 2007; 102: 186-191
- Partial least squares analysis of neuroimaging data: Applications and advances.Neuroimage. 2004; 23: S250-S263
- Theoretical, statistical, and practical perspectives on pattern-based classification approaches to the analysis of functional neuroimaging data.J Cogn Neurosci. 2007; 19: 1735-1752
- Optimizing the fMRI data-processing pipeline using prediction and reproducibility performance metrics: I.Neuroimage. 2004; 23: S196-S207
- Fisher discriminative analysis of resting-state brain function for attention-deficit/hyperactivity disorder.Neuroimage. 2008; 40: 110-120
- Misattribution of speech and impaired connectivity in patients with auditory verbal hallucinations.Hum Brain Mapp. 2007; 28: 1213-1222
- Synaptic plasticity and dysconnection in schizophrenia.Biol Psychiatry. 2006; 59: 929-939
- Altered effective connectivity within the language network in primary progressive aphasia.J Neurosci. 2007; 27: 1334-1345
- Investigations into resting-state connectivity using independent component analysis.Philos Trans R Soc Lond B Biol Sci. 2005; 360: 1001-1013
- Functional connectivity in the resting brain: A network analysis of the default mode hypothesis.Proc Natl Acad Sci U S A. 2003; 100: 253-258
- Aberrant “default mode” functional connectivity in schizophrenia.Am J Psychiatry. 2007; 164: 450-457
- Age-related changes in brain activity across the adult lifespan.J Cogn Neurosci. 2006; 18: 227-241
- Beyond mind-reading: Multi-voxel pattern analysis of fMRI data.Trends Cogn Sci. 2006; 10: 424-430
- Distributed and overlapping representations of faces and objects in ventral temporal cortex.Science. 2001; 293: 2425-2430
- Partially distributed representations of objects and faces in ventral temporal cortex.J Cogn Neurosci. 2005; 17: 580-590
- Comparing hemodynamic models with DCM.Neuroimage. 2007; 38: 387-401
Article info
Publication history
Published online: August 22, 2008
Accepted:
June 12,
2008
Received in revised form:
June 9,
2008
Received:
April 24,
2008
Identification
Copyright
© 2008 Society of Biological Psychiatry. Published by Elsevier Inc. All rights reserved.